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Coordinated evolution of co-expressed gene clusters in the Drosophila transcriptome

Creator: Mezey, Jason G, Nuzhdin, Sergey V, Ye, Fangfei, Jones, Corbin

Abstract Background Co-expression of genes that physically cluster together is a common characteristic of eukaryotic transcriptomes. This organization of transcriptomes suggests that coordinated evolution of gene expression for clustered genes may (more)

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12862_2007_article_571.pdf

Collection: BioMed Central

Date Deposited: 2015-11-27

pdf  (2 MB)

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Additional File 1 MA plots

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

ppt  (466 KB)

xls

Additional File 10 Over-represented gene classes

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

xls  (22 KB)

7z

Additional File 2 Array data without mask.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

7z  (4.6 MB)

7z

Additional File 3 Array data with mask.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

7z  (3.3 MB)

xls

Additional File 5 Merged windows among species 1.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

xls  (2.3 MB)

xls

Additional File 6 Merged windows among species 2.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

xls  (23.5 KB)

7z

Additional File 7 Drosophila simulans sliding window analysis.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

7z  (2.1 MB)

xls

Additional File 8 Merged windows Drosophila simulans 1.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

xls  (2 MB)

xls

Additional File 9 Merged windows Drosophila simulans 2.

Collection: BioMed Central

Date Deposited: 2015-11-27

Date Created: 2015-11-27

xls  (48.5 KB)