Mining the Arabidopsis thalianagenome for highly-divergent seven transmembrane receptors
Creators: Moriyama, Etsuko N, Strope, Pooja K, Opiyo, Stephen O, Chen, Zhongying, Jones, Alan M
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- Date Deposited: 2012-09-05
- Date Created: 2006-10-25
Abstract To identify divergent seven-transmembrane receptor (7TMR) candidates from the Arabidopsis thaliana genome, multiple protein classification methods were combined, including both alignment-based and alignment-free classifiers. This resolved problems in optimally training individual classifiers using limited and divergent samples, and increased stringency for candidate proteins. We identified 394 proteins as 7TMR candidates and highlighted 54 with corresponding expression patterns for further investigation.